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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
209
ChIP-seq
Assay category
209
DNA binding
Target of assay
121
histone
121
histone modification
73
broad histone mark
48
narrow histone mark
46
transcription factor
42
control
8
RNA binding protein
3
chromatin remodeller
Date released
649
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
317
August, 2021
288
October, 2019
216
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
115
May, 2019
105
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
209
bam
166
bed narrowPeak
166
bigWig
144
bigBed narrowPeak
94
fastq
15
bed bed3+
Organism
209
Homo sapiens
Biosample type
158
tissue
43
in vitro differentiated cells
5
primary cell
3
stem cell
Organ
63
liver
50
blood vessel
50
vasculature
28
brain
24
epithelium
21
heart
13
embryo
7
limb
7
musculature of body
artery
5
kidney
2
pancreas
Project
209
AMP
Genome assembly (visualization)
171
hg19
170
GRCh38
Lab
209
AMP-T2D consortium
Audit category:
27
inconsistent control
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
organ_slims!
artery
BIOSAMPLE
ASSAY
209 results
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Clear Filters
ChIP-seq
tissue
liver
38
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 7 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
kidney epithelial cell
5
stem cell
hESC
3
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