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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
41
WGBS
37
single cell RNA-seq
26
total RNA-seq
22
snATAC-seq
1
pCHi-C
Assay category
99
DNA accessibility
63
Transcription
41
DNA methylation
Date released
649
February, 2021
318
November, 2017
314
May, 2020
297
August, 2021
259
May, 2021
212
August, 2017
200
May, 2022
197
June, 2019
170
February, 2023
168
July, 2018
110
October, 2019
105
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
25
May, 2019
23
February, 2018
23
February, 2020
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
134
zippedFastqFolder
38
bed narrowPeak
28
fastq
27
bam
23
bigWig
7
txt
3
tsv
1
bed bed3+
1
bedpe bed3+
Organism
204
Homo sapiens
Biosample type
137
primary cell
66
tissue
1
in vitro differentiated cells
Organ
107
pancreas
83
epithelium
40
liver
2
musculature of body
1
adipose tissue
1
connective tissue
Project
134
HPAP
70
AMP
Genome assembly (visualization)
42
hg19
3
GRCh38
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
6
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
artery
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
204 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
snATAC-seq
pCHi-C
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
2
pancreatic beta cell
13
16
pancreatic acinar cell
4
1
tissue
liver
20
20
islet of Langerhans
18
6
skeletal muscle tissue
1
1
in vitro differentiated cells
white fat cell
1
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