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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
6
single cell RNA-seq
4
ATAC-seq
3
ChIP-seq
3
snDrop-seq
2
pCHi-C
Assay category
6
Transcription
4
DNA accessibility
3
DNA binding
Target of assay
3
control
Date released
214
August, 2021
162
August, 2017
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
102
February, 2021
94
February, 2023
66
May, 2022
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
10
November, 2020
9
October, 2017
8
February, 2018
8
January, 2021
8
June, 2019
7
January, 2018
6
November, 2018
5
December, 2018
5
December, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
January, 2019
1
October, 2022
1
September, 2018
Available data
89
txt
8
tsv
6
csv
4
bam
4
bed bedgraph
3
tagAlign
2
bed bed3+
Organism
102
Homo sapiens
Biosample type
93
tissue
4
cell line
4
in vitro differentiated cells
1
primary cell
Organ
84
bone element
8
kidney
5
connective tissue
2
artery
2
blood vessel
2
heart
2
liver
2
vasculature
Project
102
AMP
Genome assembly (visualization)
574
hg19
GRCh38
Lab
102
AMP-T2D consortium
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
5
audit script error
organ_slims!
blood
assembly!
GRCh38
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
102 results
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RNA microarray
single cell RNA-seq
ATAC-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
2
HepG2
1
iPSC derived cell line
1
in vitro differentiated cells
adipocyte
4
primary cell
osteoblast
1
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