Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
single cell RNA-seq
21
ChIP-seq
3
Hi-C
3
pCHi-C
3
total RNA-seq
2
RRBS
2
WGBS
Assay category
95
Transcription
21
DNA binding
4
DNA methylation
3
3D chromatin structure
Target of assay
20
control
1
histone
1
histone modification
1
narrow histone mark
Date released
92
August, 2021
11
April, 2019
6
May, 2019
5
March, 2020
4
July, 2019
3
February, 2020
2
February, 2021
2
June, 2019
February, 2023
1
October, 2019
Available data
98
tsv
20
bam
3
bedpe bed3+
3
hic
2
bed bedMethyl
2
bigBed bedMethyl
2
tagAlign
1
bed narrowPeak
1
bigWig
Organism
126
Homo sapiens
Biosample type
121
tissue
3
primary cell
2
cell line
Organ
260
liver
255
pancreas
178
epithelium
149
kidney
126
heart
104
connective tissue
85
bone element
68
brain
66
adipose tissue
45
vasculature
43
blood vessel
43
musculature of body
26
limb
24
eye
20
lung
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
126
AMP
Genome assembly (visualization)
GRCh38
188
hg19
Lab
126
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
blood
assembly!
GRCh38
month_released!
February, 2023
BIOSAMPLE
ASSAY
126 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ChIP-seq
Hi-C
pCHi-C
total RNA-seq
RRBS
WGBS
tissue
heart left ventricle
18
7
1
1
1
2
heart right ventricle
17
2
1
1
right cardiac atrium
18
1
1
left cardiac atrium
18
aortic valve
4
+ See 10 more…
primary cell
cardiac fibroblast
2
1
cell line
smooth muscle cell of the coronary artery
2
See all biosamples
Download