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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
ChIP-seq
7
WGBS
6
RRBS
3
DNase-seq
1
FAIRE-seq
Assay category
144
DNA binding
13
DNA methylation
4
DNA accessibility
Target of assay
96
histone
96
histone modification
60
broad histone mark
47
control
36
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
213
August, 2021
200
May, 2022
169
February, 2023
161
August, 2017
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
18
April, 2020
17
December, 2017
16
April, 2019
10
November, 2020
9
October, 2017
8
February, 2018
8
January, 2021
8
June, 2019
7
January, 2018
6
November, 2018
5
December, 2018
5
December, 2019
4
July, 2018
4
November, 2019
4
September, 2017
3
March, 2019
3
May, 2023
3
October, 2022
1
August, 2018
1
August, 2022
1
January, 2019
1
September, 2018
Available data
67
tagAlign
37
fastq
32
bam
25
bigWig
24
bed narrowPeak
22
bed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
4
bigBed narrowPeak
2
bigBed broadPeak
Organism
161
Homo sapiens
Biosample type
125
tissue
19
in vitro differentiated cells
17
primary cell
Organ
60
connective tissue
41
adipose tissue
35
liver
35
pancreas
26
musculature of body
12
epithelium
Project
161
AMP
Genome assembly (visualization)
270
hg19
GRCh38
Lab
161
AMP-T2D consortium
organ_slims!
blood
assembly!
GRCh38
BIOSAMPLE
ASSAY
161 results
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ChIP-seq
WGBS
RRBS
DNase-seq
FAIRE-seq
tissue
subcutaneous abdominal adipose tissue
36
3
liver
30
3
1
skeletal muscle tissue
22
4
islet of Langerhans
21
1
adipose tissue
1
1
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in vitro differentiated cells
adipocyte
19
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
1
2
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