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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
3
ChIP-seq
Assay category
8
Transcription
3
DNA binding
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
6
February, 2021
3
November, 2017
1
November, 2018
1
September, 2018
Available data
2943
bam
2765
bigWig
1586
tsv
1271
bed narrowPeak
1196
fastq
747
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
6
tissue
3
cell line
2
primary cell
Organ
5
kidney
4
liver
Project
11
AMP
Genome assembly (visualization)
3
hg19
Lab
11
AMP-T2D consortium
Audit category:
5
audit script error
organ_slims!
blood
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
11 results
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single cell RNA-seq
ChIP-seq
tissue
kidney
5
liver
1
cell line
HepG2
3
primary cell
pancreatic cell
2
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