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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
3
ChIP-seq
Assay category
8
Transcription
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
6
February, 2021
3
November, 2017
1
November, 2018
1
September, 2018
Available data
3015
bam
2813
bigWig
1612
bed narrowPeak
1444
tsv
1041
fastq
912
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
252
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
6
tissue
3
cell line
2
primary cell
Organ
5
kidney
4
liver
1
blood vessel
epithelium
1
vasculature
1
vein
Project
11
AMP
Genome assembly (visualization)
3
hg19
Lab
11
AMP-T2D consortium
Audit category:
5
audit script error
organ_slims!
blood
epithelium
BIOSAMPLE
ASSAY
11 results
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single cell RNA-seq
ChIP-seq
tissue
kidney
5
liver
1
cell line
HepG2
3
primary cell
pancreatic cell
2
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