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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
5
total RNA-seq
4
ATAC-seq
1
Hi-C
Assay category
7
DNA binding
5
Transcription
4
DNA accessibility
1
3D chromatin structure
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
November, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
13
bam
13
fastq
11
bigWig
6
bed narrowPeak
6
bigBed narrowPeak
5
tsv
1
bed broadPeak
1
bedpe
1
hic
Organism
17
Homo sapiens
Biosample type
12
tissue
5
cell line
Organ
blood
18
bodily fluid
7
spleen
5
liver
5
pancreas
Project
17
AMP
Genome assembly (visualization)
14
hg19
13
GRCh38
Lab
12
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
organ_slims!
blood
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
tissue
spleen
7
islet of Langerhans
4
1
cell line
HepG2
5
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