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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
8
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
55
DNA binding
9
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
52
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
3
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
399
May, 2021
354
August, 2017
341
May, 2020
329
February, 2021
318
August, 2021
313
October, 2019
217
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
96
July, 2019
94
December, 2017
80
April, 2019
73
September, 2018
72
November, 2018
63
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
49
April, 2018
47
September, 2023
39
February, 2018
23
February, 2020
22
October, 2017
19
April, 2020
16
November, 2020
14
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
6
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
72
fastq
71
bam
67
bigWig
60
bed narrowPeak
60
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
72
Homo sapiens
Biosample type
46
cell line
25
tissue
1
primary cell
Organ
53
liver
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
adipose tissue
1
connective tissue
Project
72
AMP
Genome assembly (visualization)
66
GRCh38
58
hg19
Lab
72
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
blood
adipose tissue
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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primary cell
pancreatic cell
1
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