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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
140
total RNA-seq
48
single cell RNA-seq
26
ATAC-seq
13
ChIP-seq
2
Hi-C
Assay category
188
Transcription
26
DNA accessibility
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
709
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
245
October, 2019
205
February, 2023
200
May, 2022
186
June, 2019
168
July, 2018
113
May, 2019
103
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
November, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
23
October, 2017
22
February, 2020
19
April, 2020
16
November, 2020
15
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
223
bam
195
bigWig
184
tsv
50
fastq
37
bed narrowPeak
2
bedpe bed3+
2
hic
Organism
229
Homo sapiens
Biosample type
160
tissue
48
primary cell
16
cell line
5
in vitro differentiated cells
Organ
212
pancreas
49
epithelium
3
connective tissue
1
adipose tissue
Project
229
AMP
Genome assembly (visualization)
223
hg19
221
GRCh38
Lab
229
AMP-T2D consortium
Audit category:
28
inconsistent ontology term
organ_slims!
blood
limb
BIOSAMPLE
ASSAY
229 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
139
19
1
adipose tissue(adipose white tissue)
1
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
cell line
EndoC_BH1
1
1
13
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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