Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
2
Hi-C
1
FAIRE-seq
Assay category
12
DNA accessibility
2
3D chromatin structure
Date released
7
June, 2019
5
October, 2019
2
July, 2019
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
14
Homo sapiens
Biosample type
9
primary cell
5
tissue
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
22
epithelium
18
ureter
16
liver
14
vasculature
12
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
3
vein
2
nerve
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
blood
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
+ See 1 more…
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
See all biosamples
Download