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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
DNase-seq
2
Hi-C
Assay category
29
DNA accessibility
2
3D chromatin structure
Date released
25
June, 2019
4
October, 2019
2
July, 2019
Available data
203
bam
173
bigWig
151
bed narrowPeak
101
bigBed narrowPeak
68
tsv
35
bed broadPeak
35
bigBed broadPeak
31
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
31
Homo sapiens
Biosample type
23
tissue
8
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
31
AMP
Genome assembly (visualization)
30
hg19
29
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
blood
BIOSAMPLE
ASSAY
31 results
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DNase-seq
Hi-C
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
coronary artery
2
tibial artery
2
+ See 1 more…
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
+ See 1 more…
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