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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
DNase-seq
Assay category
197
DNA accessibility
DNA binding
Date released
182
June, 2019
9
November, 2018
3
October, 2019
2
August, 2017
1
November, 2020
Available data
1733
bam
1705
bigWig
1532
tsv
501
fastq
436
bed narrowPeak
231
bigBed narrowPeak
209
bed bed3+
199
bed broadPeak
197
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
bed bedgraph
3
cool
3
hdf5
2
ibed
1
bedpe
1
vcf
Organism
197
Homo sapiens
Biosample type
171
tissue
24
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
blood vessel
9
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
197
AMP
Genome assembly (visualization)
196
GRCh38
175
hg19
Lab
197
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
blood vessel
assay_slims!
DNA binding
files.file_type!
bed bedgraph
BIOSAMPLE
ASSAY
197 results
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Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 36 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 15 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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