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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
7
ATAC-seq
6
total RNA-seq
4
Hi-C
1
WGBS
Assay category
DNA binding
41
DNA accessibility
6
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
32
June, 2019
7
October, 2019
6
February, 2021
5
July, 2019
2
February, 2020
Available data
46
bam
41
bed narrowPeak
40
bigWig
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
34
bigBed narrowPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
52
tissue
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
52
AMP
Genome assembly (visualization)
46
GRCh38
45
hg19
Lab
52
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
blood vessel
assay_slims!
DNA binding
month_released!
April, 2020
BIOSAMPLE
ASSAY
52 results
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DNase-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
tibial nerve
2
1
5
gastrocnemius medialis
1
4
distal epiphysis of femur
1
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