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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
1
Hi-C
Assay category
3
DNA binding
1
3D chromatin structure
Target of assay
3
transcription factor
1
RNA binding protein
Date released
3
November, 2017
1
March, 2019
Available data
3212
bam
3019
bigWig
1688
bed narrowPeak
1532
tsv
1355
fastq
963
bigBed narrowPeak
392
tagAlign
309
bed broadPeak
272
bigBed broadPeak
262
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
4
Homo sapiens
Biosample type
3
cell line
1
tissue
Organ
3
liver
blood vessel
1
epithelium
1
pancreas
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
organ_slims!
blood vessel
assay_slims!
DNA sequencing
BIOSAMPLE
ASSAY
4 results
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ChIP-seq
Hi-C
cell line
HepG2
3
tissue
islet of Langerhans
1
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