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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1560
ChIP-seq
1186
total RNA-seq
297
ATAC-seq
205
single cell RNA-seq
203
DNase-seq
87
RNA microarray
39
pCHi-C
26
WGBS
21
Hi-C
21
RRBS
18
small RNA-seq
5
GRO-seq
4
FAIRE-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
6
DNA accessibility
Date released
2
July, 2019
1
August, 2017
1
August, 2022
1
May, 2022
1
November, 2018
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
2
fastq
1
bed bed3+
1
txt
Organism
6
Homo sapiens
Biosample type
6
tissue
Organ
3
pancreas
blood vessel
1
brain
1
epithelium
1
kidney
1
musculature of body
1
vasculature
1
vein
Project
6
AMP
Genome assembly (visualization)
5
hg19
Lab
48
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
AMP-T2D consortium
6
Katalin Susztak, Upenn
Audit category:
2
audit script error
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
6 results
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FAIRE-seq
snATAC-seq
tissue
islet of Langerhans
1
1
frontal cortex
1
kidney
1
pancreas
1
skeletal muscle tissue
1
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