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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
4
Hi-C
2
RRBS
2
total RNA-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
9
DNA binding
4
3D chromatin structure
3
Transcription
2
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
3
control
2
narrow histone mark
Date released
11
August, 2017
4
July, 2019
2
February, 2020
1
March, 2020
1
May, 2022
Available data
bam
3
tsv
2
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
234
pancreas
205
kidney
179
epithelium
176
heart
89
bone element
70
liver
65
connective tissue
blood vessel
45
vasculature
44
adipose tissue
39
artery
34
brain
26
eye
20
lung
19
musculature of body
8
blood
8
bodily fluid
8
limb
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
hg19
Lab
19
AMP-T2D consortium
organ_slims!
blood vessel
assembly!
hg19
files.file_type!
bam
BIOSAMPLE
ASSAY
19 results
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table-tab-icon
Clear Filters
ChIP-seq
Hi-C
RRBS
total RNA-seq
pCHi-C
single cell RNA-seq
tissue
skeletal muscle tissue
9
2
1
gastrocnemius medialis
4
1
left ventricle myocardium
1
psoas muscle
1
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