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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
493
total RNA-seq
14
ATAC-seq
2
pCHi-C
Assay category
493
Transcription
14
DNA accessibility
DNA binding
Date released
509
February, 2021
233
May, 2020
193
May, 2021
164
July, 2018
160
June, 2019
103
August, 2017
82
July, 2019
49
April, 2018
48
November, 2019
45
February, 2023
40
September, 2018
39
May, 2022
32
October, 2019
31
August, 2021
26
March, 2020
15
February, 2018
10
November, 2018
7
October, 2017
6
November, 2020
5
December, 2019
5
January, 2019
5
September, 2017
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
2
October, 2018
1
May, 2023
Available data
504
bam
494
bigWig
493
tsv
10
bed narrowPeak
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
509
Homo sapiens
Biosample type
452
tissue
28
cell line
26
in vitro differentiated cells
3
primary cell
Organ
455
connective tissue
386
adipose tissue
66
bone element
60
artery
blood vessel
60
heart
60
vasculature
26
epithelium
26
pancreas
8
skeleton
6
limb
2
liver
Project
509
AMP
Genome assembly (visualization)
509
hg19
503
GRCh38
Lab
509
AMP-T2D consortium
Audit category:
44
inconsistent ontology term
1
inconsistent replicate
organ_slims!
blood vessel
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
509 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
distal epiphysis
1
+ See 7 more…
cell line
EndoC_BH1
26
HepG2
1
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
4
primary cell
osteoblast
1
1
1
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