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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
57
ChIP-seq
45
ATAC-seq
Assay category
188
Transcription
57
DNA binding
45
DNA accessibility
Target of assay
28
transcription factor
27
histone
27
histone modification
27
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
510
February, 2021
316
May, 2021
278
November, 2017
276
August, 2017
260
May, 2020
183
June, 2019
180
October, 2019
164
July, 2018
82
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
58
May, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
31
February, 2018
30
December, 2018
29
March, 2020
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
290
bam
290
bigWig
188
tsv
57
bed narrowPeak
30
bigBed narrowPeak
30
fastq
27
tagAlign
Organism
290
Homo sapiens
Biosample type
173
tissue
90
primary cell
27
cell line
Organ
170
liver
27
blood
27
bodily fluid
3
spleen
Project
245
AMP
45
T1D
Genome assembly (visualization)
290
hg19
237
GRCh38
Lab
245
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
1
inconsistent control
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
290 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
liver
143
27
spleen
3
primary cell
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
T-helper 17 cell
2
2
+ See 20 more…
cell line
GM12878
27
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