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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
3
single cell RNA-seq
Assay category
28
DNA binding
3
Transcription
Target of assay
716
histone modification
715
histone
428
transcription factor
386
narrow histone mark
328
broad histone mark
86
RNA binding protein
85
recombinant protein
31
control
26
chromatin remodeller
5
other context
5
other post-translational modification
Date released
15
November, 2017
5
December, 2017
3
August, 2017
3
July, 2019
3
May, 2021
2
September, 2017
Available data
28
bam
25
fastq
22
bigWig
9
bed bed3+
3
tsv
2
tagAlign
Organism
31
Homo sapiens
Biosample type
13
cell line
9
primary cell
5
in vitro differentiated cells
3
tissue
1
stem cell
Organ
14
liver
6
brain
2
epithelium
2
pancreas
2
vasculature
blood vessel
1
connective tissue
1
embryo
Project
31
AMP
Genome assembly (visualization)
31
hg19
12
GRCh38
Lab
28
AMP-T2D consortium
3
Kyle Gaulton, UCSD
organ_slims!
blood vessel
bodily fluid
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
+ See 1 more…
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
liver
1
stem cell
hESC
1
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