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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
1
RRBS
Assay category
3
DNA binding
2
DNA accessibility
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
3
November, 2017
2
June, 2019
1
July, 2019
Available data
5
bam
5
bigWig
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
854
pancreas
684
connective tissue
491
adipose tissue
445
epithelium
390
liver
335
kidney
287
heart
286
brain
170
vasculature
blood vessel
159
bone element
122
limb
96
musculature of body
75
artery
61
eye
43
nerve
29
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
8
blood
8
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
6
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
blood vessel
biosample_type!
cell line
BIOSAMPLE
ASSAY
6 results
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Clear Filters
ChIP-seq
DNase-seq
RRBS
primary cell
choroid plexus epithelial cell
3
1
1
smooth muscle cell of the brain vasculature
1
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