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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
Assay category
3
DNA binding
2
DNA accessibility
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
3
November, 2017
2
June, 2019
Available data
5
bam
5
bigWig
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
bed bed3+
bed bedMethyl
1
bigBed bedMethyl
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
934
pancreas
788
liver
681
connective tissue
518
epithelium
489
adipose tissue
385
heart
288
kidney
284
brain
234
vasculature
blood vessel
141
artery
121
limb
91
musculature of body
71
bone element
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
23
spleen
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
5
AMP
Genome assembly (visualization)
5
hg19
4
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
blood vessel
files.file_type!
bed bedMethyl
txt
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
DNase-seq
primary cell
choroid plexus epithelial cell
3
1
smooth muscle cell of the brain vasculature
1
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