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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
5
DNase-seq
1
pCHi-C
Assay category
6
DNA binding
5
DNA accessibility
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
3
August, 2017
3
August, 2021
3
November, 2018
2
June, 2019
1
February, 2021
Available data
681
bam
621
bigWig
465
fastq
441
bed narrowPeak
358
bigBed narrowPeak
174
tsv
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
12
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
vcf
Organism
12
Homo sapiens
Biosample type
6
tissue
5
primary cell
1
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
12
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
12
AMP-T2D consortium
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
12 results
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Clear Filters
ChIP-seq
DNase-seq
pCHi-C
tissue
liver
3
2
right lobe of liver
1
primary cell
hepatocyte
3
1
hepatic stellate cell
1
cell line
HepG2
1
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