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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
DNase-seq
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
48
transcription factor
27
histone
27
histone modification
14
broad histone mark
13
narrow histone mark
8
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
62
November, 2017
13
August, 2017
Available data
1479
bam
1274
bigWig
1212
bed narrowPeak
854
fastq
732
bigBed narrowPeak
392
tagAlign
110
bed broadPeak
75
bigBed broadPeak
53
bed bed3+
3
tar
1
tagAlign bed3+
Organism
75
Homo sapiens
Biosample type
58
cell line
17
primary cell
Organ
58
liver
6
brain
6
epithelium
6
vasculature
blood vessel
2
vein
Project
75
AMP
Genome assembly (visualization)
75
hg19
60
GRCh38
Lab
75
AMP-T2D consortium
Audit category:
13
inconsistent control read length
1
inconsistent assembly
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
cell line
HepG2
58
primary cell
skeletal muscle myoblast
13
astrocyte of the cerebellum
2
choroid plexus epithelial cell
2
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