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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
5
DNase-seq
Assay category
13
DNA binding
5
DNA accessibility
Target of assay
11
histone
11
histone modification
6
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
182
June, 2019
62
November, 2017
15
August, 2017
9
November, 2018
3
October, 2019
1
November, 2020
Available data
486
bam
443
bigWig
297
bed narrowPeak
287
fastq
134
tagAlign
105
tsv
79
bigBed narrowPeak
44
bed broadPeak
37
bed bed3+
18
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
3
bedpe bed3+
3
hic
1
hdf5
1
tagAlign bed3+
Organism
18
Homo sapiens
Biosample type
14
primary cell
2
tissue
1
cell line
1
in vitro differentiated cells
Organ
blood vessel
6
vasculature
4
epithelium
4
limb
4
vein
2
artery
2
nerve
1
connective tissue
1
pancreas
Project
18
AMP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle myoblast
13
1
tissue
tibial nerve
2
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
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