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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
5
GRO-seq
5
total RNA-seq
3
ATAC-seq
Assay category
25
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
35
fastq
34
bigWig
30
bam
21
bed narrowPeak
21
bigBed narrowPeak
5
tsv
Organism
38
Homo sapiens
Biosample type
24
cell line
9
tissue
4
in vitro differentiated cells
1
stem cell
Organ
19
blood
19
bodily fluid
7
spleen
5
liver
1
adipose tissue
1
connective tissue
1
embryo
1
musculature of body
Project
38
AMP
Genome assembly (visualization)
29
hg19
26
GRCh38
5
hg18
Lab
38
AMP-T2D consortium
organ_slims!
blood vessel
month_released!
August, 2018
BIOSAMPLE
ASSAY
38 results
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Clear Filters
ChIP-seq
GRO-seq
total RNA-seq
ATAC-seq
cell line
GM12878
18
1
HepG2
5
tissue
spleen
7
adipose tissue
1
skeletal muscle tissue
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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