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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
26
ATAC-seq
13
ChIP-seq
2
Hi-C
Assay category
42
Transcription
26
DNA accessibility
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
59
bam
42
tsv
37
bed narrowPeak
31
bigWig
2
bedpe bed3+
2
hic
Organism
83
Homo sapiens
Biosample type
62
tissue
16
cell line
5
in vitro differentiated cells
Organ
56
pancreas
16
epithelium
12
brain
3
adipose tissue
blood vessel
3
connective tissue
3
heart
3
limb
3
vasculature
2
artery
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
83
AMP
Genome assembly (visualization)
59
hg19
57
GRCh38
Lab
83
AMP-T2D consortium
Audit category:
23
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
83 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
adipose tissue(adipose white tissue)
1
amygdala
1
+ See 19 more…
cell line
EndoC_BH1
1
1
13
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
See all biosamples
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