Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
39
total RNA-seq
18
small RNA-seq
15
RRBS
10
WGBS
9
ATAC-seq
6
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
76
DNA binding
60
Transcription
25
DNA methylation
11
DNA accessibility
6
3D chromatin structure
Target of assay
56
histone
56
histone modification
36
broad histone mark
21
control
20
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
154
bam
138
bigWig
68
bed narrowPeak
65
bigBed narrowPeak
60
tsv
22
bed bedMethyl
22
bigBed bedMethyl
11
fastq
4
bed bed3+
2
hdf5
Organism
178
Homo sapiens
Biosample type
141
tissue
37
primary cell
Organ
62
vasculature
blood vessel
46
brain
46
heart
23
epithelium
19
pancreas
18
connective tissue
17
musculature of body
16
kidney
12
adipose tissue
12
limb
10
liver
8
artery
2
pericardium
1
eye
Project
178
AMP
Genome assembly (visualization)
147
hg19
135
GRCh38
Lab
178
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
178 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
RRBS
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
temporal lobe
15
1
1
angular gyrus
13
right atrium auricular region
10
2
1
germinal matrix
12
heart left ventricle
2
1
4
2
+ See 24 more…
primary cell
kidney epithelial cell
5
1
1
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
mesenchymal stem cell of adipose
1
1
pancreatic alpha cell
2
+ See 19 more…
See all biosamples
Download