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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
DNase-seq
47
single cell RNA-seq
37
ChIP-seq
5
ATAC-seq
Assay category
187
DNA accessibility
47
Transcription
37
DNA binding
Target of assay
19
histone
19
histone modification
14
control
11
narrow histone mark
8
broad histone mark
4
RNA binding protein
4
transcription factor
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
224
bam
210
bed narrowPeak
210
bigBed narrowPeak
210
bigWig
184
bed bed3+
182
bed broadPeak
182
bigBed broadPeak
11
fastq
Organism
271
Homo sapiens
Biosample type
213
tissue
58
primary cell
Organ
128
kidney
43
musculature of body
35
heart
32
limb
30
brain
25
epithelium
18
connective tissue
18
ureter
15
pancreas
7
eye
7
vasculature
blood vessel
2
artery
2
liver
1
adipose tissue
Project
224
AMP
47
KPMP
Genome assembly (visualization)
212
GRCh38
190
hg19
Lab
224
AMP-T2D consortium
47
KPMP
Audit category:
26
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
271 results
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Clear Filters
DNase-seq
single cell RNA-seq
ChIP-seq
ATAC-seq
tissue
kidney
13
47
heart
18
muscle of arm
17
muscle of leg
13
brain
12
+ See 33 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 18 more…
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