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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
DNase-seq
47
single cell RNA-seq
3
ChIP-seq
Assay category
77
DNA accessibility
47
Transcription
3
DNA binding
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
130
August, 2021
80
June, 2019
47
September, 2023
30
October, 2019
23
April, 2019
14
May, 2023
11
July, 2019
8
February, 2021
5
May, 2019
3
December, 2019
2
March, 2020
Available data
80
bam
79
bed narrowPeak
79
bigBed narrowPeak
79
bigWig
77
bed bed3+
77
bed broadPeak
77
bigBed broadPeak
Organism
127
Homo sapiens
Biosample type
115
tissue
12
primary cell
Organ
128
kidney
43
musculature of body
35
heart
32
limb
30
brain
20
epithelium
18
connective tissue
18
ureter
7
eye
7
vasculature
blood vessel
4
pancreas
2
artery
2
liver
1
adipose tissue
Project
80
AMP
47
KPMP
Genome assembly (visualization)
79
GRCh38
73
hg19
Lab
80
AMP-T2D consortium
47
KPMP
Audit category:
4
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
127 results
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DNase-seq
single cell RNA-seq
ChIP-seq
tissue
kidney
13
47
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
primary cell
epithelial cell of proximal tubule
1
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
glomerular endothelial cell
1
kidney epithelial cell
1
+ See 2 more…
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