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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
28
DNase-seq
3
ATAC-seq
Assay category
107
DNA binding
31
DNA accessibility
Target of assay
95
histone
95
histone modification
57
broad histone mark
38
narrow histone mark
12
transcription factor
10
RNA binding protein
Date released
47
April, 2019
40
May, 2024
31
June, 2019
12
May, 2019
5
October, 2019
3
July, 2019
Available data
160
bigWig
138
bed narrowPeak
135
bam
113
tsv
89
bigBed narrowPeak
28
bed bed3+
28
bed broadPeak
28
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
3
bedpe bed3+
3
hic
Organism
138
Homo sapiens
Biosample type
132
tissue
6
primary cell
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
bone element
8
skeleton
1
pituitary gland
Project
138
AMP
Genome assembly (visualization)
137
GRCh38
95
hg19
Lab
98
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
organ_slims!
blood vessel
bone element
BIOSAMPLE
ASSAY
138 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
left cardiac atrium
40
1
heart left ventricle
29
3
2
heart
12
18
heart right ventricle
11
1
right atrium auricular region
7
2
1
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primary cell
cardiac fibroblast
3
3
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