Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
34
DNase-seq
6
total RNA-seq
4
Hi-C
1
ATAC-seq
1
WGBS
Assay category
44
DNA binding
35
DNA accessibility
6
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
32
histone
32
histone modification
20
broad histone mark
12
control
12
narrow histone mark
Date released
44
October, 2019
32
June, 2019
7
May, 2019
5
July, 2019
2
February, 2020
Available data
82
bam
70
bigWig
65
bed narrowPeak
64
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
90
Homo sapiens
Biosample type
90
tissue
Organ
946
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
blood vessel
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
90
AMP
Genome assembly (visualization)
69
GRCh38
69
hg19
Lab
90
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
blood vessel
bone element
BIOSAMPLE
ASSAY
90 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
Hi-C
ATAC-seq
WGBS
tissue
tibial nerve
35
2
5
1
muscle of leg
7
13
1
muscle of arm
17
gastrocnemius medialis
1
4
islet of Langerhans
2
+ See 2 more…
See all biosamples
Download