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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
total RNA-seq
17
small RNA-seq
11
RRBS
10
WGBS
6
Hi-C
4
ATAC-seq
3
single cell RNA-seq
1
FAIRE-seq
Assay category
54
Transcription
21
DNA methylation
6
3D chromatin structure
5
DNA accessibility
Target of assay
3
control
Date released
641
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
237
October, 2019
200
May, 2022
183
August, 2021
170
February, 2023
168
July, 2018
133
June, 2019
94
December, 2017
88
November, 2018
86
July, 2019
76
October, 2018
73
September, 2018
65
May, 2019
61
November, 2019
59
September, 2020
58
March, 2020
57
April, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
68
bigWig
66
bam
54
tsv
18
bed bedMethyl
18
bigBed bedMethyl
4
bed narrowPeak
2
bed bed3+
2
hdf5
1
bigBed narrowPeak
Organism
86
Homo sapiens
Biosample type
66
tissue
20
primary cell
Organ
25
heart
18
brain
18
connective tissue
13
epithelium
12
adipose tissue
12
vasculature
blood vessel
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
86
AMP
Genome assembly (visualization)
71
hg19
65
GRCh38
Lab
86
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
blood vessel
kidney
BIOSAMPLE
ASSAY
86 results
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total RNA-seq
small RNA-seq
RRBS
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
1
4
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 20 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 12 more…
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