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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
389
ChIP-seq
Assay category
389
DNA binding
Target of assay
242
transcription factor
74
histone
74
histone modification
70
control
66
recombinant protein
46
broad histone mark
36
RNA binding protein
28
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
506
February, 2021
389
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
213
June, 2019
204
October, 2019
164
July, 2018
94
December, 2017
87
November, 2018
79
April, 2019
76
October, 2018
73
July, 2019
72
September, 2018
70
May, 2019
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
15
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
389
bam
331
bigWig
321
fastq
311
bed narrowPeak
310
bigBed narrowPeak
78
tagAlign
68
bed broadPeak
62
bigBed broadPeak
3
tar
Organism
389
Homo sapiens
Biosample type
314
cell line
69
tissue
6
primary cell
Organ
314
liver
78
brain
6
epithelium
6
vasculature
blood vessel
Project
389
AMP
Genome assembly (visualization)
278
GRCh38
277
hg19
Lab
389
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
blood vessel
mammary gland
BIOSAMPLE
ASSAY
389 results
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Clear Filters
ChIP-seq
cell line
HepG2
314
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
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primary cell
astrocyte of the cerebellum
3
choroid plexus epithelial cell
3
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