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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
62
histone
62
histone modification
48
transcription factor
34
broad histone mark
28
narrow histone mark
8
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
15
August, 2017
12
November, 2017
1
October, 2017
Available data
416
bigWig
405
bed narrowPeak
380
bam
174
tagAlign
125
bigBed narrowPeak
109
fastq
28
bed broadPeak
13
bed bed3+
13
bigBed broadPeak
1
tagAlign bed3+
Organism
26
Homo sapiens
Biosample type
15
tissue
7
primary cell
6
cell line
Organ
8
brain
6
liver
5
musculature of body
4
pancreas
2
epithelium
2
vasculature
1
adipose tissue
blood vessel
1
connective tissue
Project
28
AMP
Genome assembly (visualization)
28
hg19
18
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
organ_slims!
blood vessel
mammary gland
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
tissue
skeletal muscle tissue
5
islet of Langerhans
2
pancreas
2
brain
1
caudate nucleus
1
+ See 4 more…
primary cell
skeletal muscle myoblast
5
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
cell line
HepG2
6
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