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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
316
ChIP-seq
Assay category
316
DNA binding
Target of assay
243
transcription factor
87
histone
histone modification
70
control
66
recombinant protein
50
broad histone mark
37
narrow histone mark
36
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
649
February, 2021
316
November, 2017
314
May, 2020
293
August, 2021
259
May, 2021
212
August, 2017
200
May, 2022
194
June, 2019
170
February, 2023
168
July, 2018
104
October, 2019
97
July, 2019
88
November, 2018
63
December, 2017
59
September, 2020
57
March, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
23
February, 2018
23
January, 2019
22
February, 2020
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
14
May, 2019
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
315
bam
304
fastq
257
bigWig
238
bed narrowPeak
238
bigBed narrowPeak
46
bed broadPeak
46
bigBed broadPeak
11
tagAlign
3
tar
Organism
316
Homo sapiens
Biosample type
300
cell line
12
tissue
4
primary cell
Organ
300
liver
18
brain
4
epithelium
4
vasculature
blood vessel
Project
316
AMP
Genome assembly (visualization)
255
hg19
206
GRCh38
Lab
316
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
organ_slims!
blood vessel
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
316 results
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Clear Filters
ChIP-seq
cell line
HepG2
300
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
choroid plexus epithelial cell
2
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