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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
3
DNase-seq
Assay category
17
DNA binding
3
DNA accessibility
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
3
RNA binding protein
transcription factor
Date released
19
June, 2019
1
May, 2019
Available data
197
bam
177
bigWig
150
tsv
85
txt
48
bed narrowPeak
20
bigBed narrowPeak
11
fastq
7
bedpe bed3+
5
bed bed3+
5
hic
3
bed broadPeak
3
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
20
Homo sapiens
Biosample type
19
primary cell
1
tissue
Organ
9
connective tissue
8
musculature of body
3
epithelium
3
heart
3
kidney
1
limb
vasculature
Project
20
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
20
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
organ_slims!
bodily fluid
vasculature
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
2
1
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
tissue
muscle of leg
1
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