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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
55
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
52
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
3
control
3
other context
3
other post-translational modification
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
80
April, 2019
77
July, 2019
74
October, 2018
72
November, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
39
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
12
January, 2019
10
November, 2020
8
December, 2018
8
January, 2021
7
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
72
bam
72
fastq
68
bigWig
61
bed narrowPeak
61
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
72
Homo sapiens
Biosample type
46
cell line
26
tissue
primary cell
Organ
53
liver
15
blood
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
72
AMP
Genome assembly (visualization)
67
GRCh38
59
hg19
Lab
72
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
bodily fluid
biosample_type!
primary cell
BIOSAMPLE
ASSAY
72 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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