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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
2
Capture-C
2
total RNA-seq
Assay category
3
DNA accessibility
2
Transcription
Date released
3
February, 2023
2
August, 2021
2
May, 2021
Available data
310
bigWig
274
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
7
Homo sapiens
Biosample type
5
in vitro differentiated cells
2
primary cell
Organ
2
connective tissue
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
AMP-T2D consortium
5
Struan F.A. Grant, CHOP
2
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
bodily fluid
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
Capture-C
total RNA-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
primary cell
CD8-positive, alpha-beta T cell
2
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