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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
16
total RNA-seq
7
ChIP-seq
3
ATAC-seq
1
Hi-C
Assay category
56
Transcription
7
DNA binding
3
DNA accessibility
1
3D chromatin structure
Target of assay
4
control
3
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
November, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
49
fastq
19
zippedFastqFolder
7
bam
6
bigWig
3
bed narrowPeak
3
bigBed narrowPeak
Organism
67
Homo sapiens
Biosample type
59
primary cell
7
tissue
1
cell line
Organ
27
blood
bodily fluid
19
epithelium
19
pancreas
7
spleen
1
liver
Project
59
HPAP
8
AMP
Genome assembly (visualization)
6
GRCh38
3
hg19
Lab
59
Klaus Kaestner, Upenn
8
AMP-T2D consortium
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
67 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ChIP-seq
ATAC-seq
Hi-C
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
tissue
spleen
7
cell line
HepG2
1
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