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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
7
ChIP-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
13
Transcription
7
DNA binding
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
November, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
17
bam
16
bigWig
14
tsv
12
fastq
6
bed narrowPeak
6
bigBed narrowPeak
Organism
22
Homo sapiens
Biosample type
10
tissue
5
cell line
5
primary cell
2
in vitro differentiated cells
Organ
18
blood
bodily fluid
10
liver
7
spleen
6
epithelium
3
kidney
Project
22
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
22
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
organ_slims!
bodily fluid
month_released!
October, 2019
BIOSAMPLE
ASSAY
22 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
RNA microarray
tissue
spleen
7
kidney
1
kidney interstitium
1
renal glomerulus
1
cell line
HepG2
5
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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