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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
5
ATAC-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
126
DNA binding
5
DNA accessibility
3
Transcription
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
29
control
5
RNA binding protein
5
transcription factor
Date released
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
November, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
134
bam
105
bigWig
102
bed narrowPeak
102
bigBed narrowPeak
15
fastq
3
tsv
2
bed bed3+
1
bedpe bed3+
Organism
135
Homo sapiens
Biosample type
121
tissue
13
primary cell
1
in vitro differentiated cells
Organ
50
blood vessel
50
vasculature
28
brain
21
heart
16
pancreas
13
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
1
adipose tissue
1
connective tissue
Project
135
AMP
Genome assembly (visualization)
107
hg19
106
GRCh38
Lab
135
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
bodily fluid
month_released!
February, 2021
BIOSAMPLE
ASSAY
135 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
pCHi-C
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 7 more…
primary cell
kidney epithelial cell
5
pancreatic alpha cell
2
2
pancreatic acinar cell
1
1
pancreatic beta cell
2
in vitro differentiated cells
white fat cell
1
See all biosamples
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