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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
16
WGBS
Assay category
35
DNA methylation
Date released
23
July, 2019
6
August, 2017
6
November, 2018
Available data
2810
bam
2647
bigWig
1481
tsv
1413
bed narrowPeak
931
fastq
687
bigBed narrowPeak
378
tagAlign
270
bed bed3+
263
bed broadPeak
226
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
35
Homo sapiens
Biosample type
25
tissue
10
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
35
AMP
Genome assembly (visualization)
19
hg19
16
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
bodily fluid
target.investigated_as!
recombinant protein
biosample_type!
cell line
BIOSAMPLE
ASSAY
35 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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