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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
ChIP-seq
157
single cell RNA-seq
132
total RNA-seq
122
ATAC-seq
111
DNase-seq
WGBS
6
RRBS
6
snATAC-seq
5
pCHi-C
4
Hi-C
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
small RNA-seq
1
FAIRE-seq
Assay category
122
DNA accessibility
Date released
64
August, 2021
35
February, 2023
11
May, 2023
8
February, 2021
4
July, 2019
Available data
111
bed narrowPeak
64
xls
12
bam
4
bigWig
Organism
122
Homo sapiens
Biosample type
114
tissue
8
cell line
Organ
152
pancreas
103
epithelium
75
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
25
connective tissue
23
liver
bone element
12
skeleton
8
limb
6
adipose tissue
4
brain
1
blood
1
bodily fluid
1
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
122
AMP
Genome assembly (visualization)
122
GRCh38
12
hg19
Lab
75
Katalin Susztak, Upenn
47
AMP-T2D consortium
organ_slims!
bone element
assay_title!
WGBS
BIOSAMPLE
ASSAY
122 results
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ATAC-seq
tissue
kidney
75
coronary artery
36
heart left ventricle
2
right atrium auricular region
1
cell line
smooth muscle cell of the coronary artery
8
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