Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1743
ChIP-seq
1461
total RNA-seq
518
ATAC-seq
362
single cell RNA-seq
203
DNase-seq
84
snATAC-seq
68
WGBS
56
pCHi-C
31
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
GRO-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
4
DNA accessibility
Date released
2
July, 2019
1
August, 2017
November, 2018
1
October, 2019
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
1
fastq
1
tar
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Organ
1
blood vessel
1
brain
1
epithelium
1
kidney
1
pancreas
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
organ_slims!
bone element
lab.title!
Bing Ren, UCSD
month_released!
November, 2018
BIOSAMPLE
ASSAY
4 results
search-icon
table-tab-icon
Clear Filters
FAIRE-seq
tissue
frontal cortex
1
islet of Langerhans
1
kidney
1
primary cell
endothelial cell of umbilical vein
1
Download