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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
single cell RNA-seq
1
MPRA
1
snATAC-seq
Assay category
5
Transcription
1
DNA accessibility
Date released
5
February, 2021
1
May, 2022
1
October, 2022
Available data
3121
bam
2801
bigWig
1535
bed narrowPeak
1430
tsv
1163
fastq
1042
bigBed narrowPeak
320
bed broadPeak
314
tagAlign
285
bigBed broadPeak
269
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
18
bedpe bed3+
16
hic
8
bed bed3
8
csv
7
txt
5
hdf5
4
bed bedgraph
4
tar
2
ibed
1
tagAlign bed3+
Organism
6
Homo sapiens
Biosample type
6
tissue
1
cell line
Organ
bone element
5
kidney
4
skeleton
1
musculature of body
Project
7
AMP
Genome assembly (visualization)
1
hg19
Lab
57
Katalin Susztak, Upenn
7
AMP-T2D consortium
6
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
6
audit script error
organ_slims!
bone element
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
7 results
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single cell RNA-seq
MPRA
snATAC-seq
tissue
kidney
5
skeletal muscle tissue
1
cell line
MIN6
1
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