Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
324
ChIP-seq
5
ATAC-seq
Assay category
324
DNA binding
5
DNA accessibility
Target of assay
244
transcription factor
88
histone
histone modification
77
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
565
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
258
May, 2021
212
August, 2017
200
May, 2022
199
June, 2019
197
February, 2023
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
328
bam
317
fastq
264
bigWig
244
bed narrowPeak
244
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
2
bed bed3+
Organism
329
Homo sapiens
Biosample type
300
cell line
18
tissue
11
primary cell
Organ
300
liver
18
brain
11
pancreas
9
epithelium
4
vasculature
2
blood vessel
Project
329
AMP
Genome assembly (visualization)
264
hg19
214
GRCh38
Lab
329
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
organ_slims!
bone element
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
329 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
300
tissue
islet of Langerhans
6
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
+ See 2 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
+ See 1 more…
See all biosamples
Download