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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
318
ChIP-seq
Assay category
318
DNA binding
Target of assay
234
transcription factor
65
recombinant protein
60
control
32
RNA binding protein
21
histone
21
histone modification
12
narrow histone mark
9
broad histone mark
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
707
February, 2021
318
November, 2017
310
August, 2017
308
May, 2021
295
August, 2021
291
May, 2020
265
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
83
December, 2017
83
November, 2018
80
April, 2019
75
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
9
October, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
371
bam
313
bigWig
303
fastq
294
bed narrowPeak
293
bigBed narrowPeak
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
318
Homo sapiens
Biosample type
293
cell line
16
tissue
9
primary cell
Organ
293
liver
25
brain
6
epithelium
6
vasculature
3
blood vessel
Project
318
AMP
Genome assembly (visualization)
253
hg19
218
GRCh38
Lab
318
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
organ_slims!
bone marrow
files.file_type!
tagAlign
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
318 results
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Clear Filters
ChIP-seq
cell line
HepG2
293
tissue
layer of hippocampus
8
middle frontal area 46
6
cerebellum (Hemisphere)
2
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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