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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
Hi-C
Assay category
1497
DNA binding
1315
Transcription
379
DNA accessibility
39
DNA methylation
20
3D chromatin structure
Date released
9
March, 2020
4
July, 2019
4
October, 2019
2
November, 2019
1
December, 2018
Available data
14
bedpe bed3+
14
hic
1
bed bed3+
1
bigWig
1
fastq
1
hdf5
Organism
20
Homo sapiens
Biosample type
13
tissue
primary cell
4
in vitro differentiated cells
3
cell line
Organ
6
musculature of body
4
limb
4
pancreas
3
heart
2
liver
1
blood vessel
1
epithelium
1
vasculature
Project
20
AMP
Genome assembly (visualization)
15
hg19
1
GRCh38
Lab
20
AMP-T2D consortium
3
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
bone marrow
biosample_type!
primary cell
BIOSAMPLE
ASSAY
20 results
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Hi-C
tissue
gastrocnemius medialis
4
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 4 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
EndoC_BH1
1
HepG2
1
Panc1
1
See all biosamples
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