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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
174
DNase-seq
2
ATAC-seq
Assay category
176
DNA accessibility
99
DNA binding
Date released
157
June, 2019
7
November, 2018
7
October, 2019
2
August, 2017
1
March, 2019
1
November, 2020
1
October, 2017
Available data
459
bed narrowPeak
354
bam
315
bigWig
208
bigBed narrowPeak
177
bed bed3+
176
bed broadPeak
174
bigBed broadPeak
99
fastq
64
xls
60
zippedFastqFolder
14
tsv
11
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
176
Homo sapiens
Biosample type
151
tissue
23
primary cell
1
cell line
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
9
connective tissue
9
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
176
AMP
Genome assembly (visualization)
174
GRCh38
162
hg19
Lab
174
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
176 results
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Clear Filters
DNase-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
renal cortex interstitium
11
+ See 27 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac muscle cell
1
+ See 13 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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